I gave at talk at SIO November 22, 2019 where I talked a bunch about seagrass microbiomes. I posted my slides to Slideshare and you can see them below.
All posts by Jonathan Eisen
Slides for recent talk on our Seagrass Microbiome Project
Gave a talk recently trying to give an overview of this project.
I posted slides to Slideshare.
Here they are
And I also recorded the slides in synch with Audio using Camtasia. See
Marine Algal and Plant Microbiomes Workshop – soliciting comments
So – am participating in a workshop, supported by CIFAR and the Gordon and Betty Moore Foundation over the next few days on “Marine Algal and Plant Microbiomes”. The workshop is basically trying to come up with a white paper / position paper on the future of such studies and to continue the conversation about this topic afterwards. We are asking questions like
- What are the challenges and opportunities in this area?
- What are the major scientific questions?
- How are such systems different from fresh water or terrestrial systems?
- How are they different?
- How are marine systems involving other hosts (e.g., coral, sponges, dolphins) comparable (i.e., is there something about marine systems that links them together in any way).
- What tools and resources could help advance work in this area?
And more
So I am posting here asking for a few bits of information from any readers.
- Are you interested in participating in follow up discussions on this topic?
- Do you know of any people we should try to bring into the conversation even if they are not, well, you?
- Are there any major projects in this area that would be worth engaging?
Any thoughts (on the topic that is) would be welcome.
Paper of possible interest: Exploring interactions of plant microbiomes
Just got alterned to this new (open access) paper that seems like it should be of interest to the Seagrass Microbiome project: Scientia Agricola – Exploring interactions of plant microbiomes. It has some useful summaries of work that has been done on plant microbiomes.
PeerJ paper of possible interest to the seagrass microbiome club
Just a quick post here – there is a new PeerJ preprint I just found out about via automated Google Scholar alerts that seems like it may be of interest: Distinct root-associated bacterial communities on three wild plant species growing in a common field from Kristin Aleklett, Jonathan W Leff, Noah Fierer, and Miranda Hart.
Marine Plant Microbiome Reference Collection
Been building a reference collection for papers about “marine plant microbiomes”. Right now it is at Mendeley – will be moving it at some point to Zotero probably.
//www.mendeley.com/groups/3429591/marine-plant-microbiomes/widget/21/3/
Marine Plant Microbiomes is a group in Biological Sciences on Mendeley.
Resources for browsing / using a phylogeny of all plants
Posted a request to Twitter and got some useful responses.
Here are some
Also see
http://onlinelibrary.wiley.com/doi/10.1111/j.1095-8339.2009.00996.x/abstract
Plant phylogeny notes
Checking out some plant phylogeny sites